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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5155205_5159692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5155205 - 5159692

Intron Length:

4488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TAATCTATATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.5

0.73

0.8

76.9

30.6

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

48.9

-0.1

1.8

61.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958