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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5159965_5160895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5159965 - 5160895

Intron Length:

931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTCTT

5'SS Class:

major

3'SS Sequence:

TTTTTTATTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

71.2

40.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.7

0.74

88.1

27.9

Minor 5ss

37.6

-1.4

3.2

60.2

44.1

Minor BPS

64.6

0.54

1.5

79.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958