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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5162394_5163948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5162394 - 5163948

Intron Length:

1555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTTCTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

74.9

36.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

87.5

0.84

0.7

81.9

29.3

Minor 5ss

43.5

-0.7

3.1

57.4

41.8

Minor BPS

69.5

0.69

1.5

82.89

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958