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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5164003_5164077_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5164003 - 5164077

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

TTTGTGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CCATCGCTAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

74.5

37.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.2

0.61

0.9

74.7

Minor 5ss

34.1

-1.8

42.1

44.8

Minor BPS

47.3

-0.2

2.3

60.56

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958