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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5164186_5164520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5164186 - 5164520

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTTTCATAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.5

29.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

78.8

0.65

0.9

70.5

40.2

Minor 5ss

35.2

-1.7

2.8

38.4

40.8

Minor BPS

70.4

0.62

1.6

80.02

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958