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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5164629_5166022_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5164629 - 5166022

Intron Length:

1394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTATTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

ATTGTTTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

79.5

0.66

0.8

77.8

35.6

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

0.33

1.5

74.22

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958