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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5166131_5168498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5166131 - 5168498

Intron Length:

2368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTGT

U12 Branch Point Sequence:

TTTGTCTTGGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

36.2

-0.8

4.3

65.7

43.2

Major PPT

77.5

0.62

0.9

68.5

42.1

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

46.7

-0.1

3.5

82.19

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958