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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5169128_5169237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5169128 - 5169237

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTGTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTCAT

U12 Branch Point Sequence:

GGTTCATGGATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

0.42

1.4

71.4

45.1

Major PPT

82.7

0.74

0.8

77.4

36.9

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

49.2

-0

1.8

62.14

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958