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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5170195_5170732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5170195 - 5170732

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTTTCCTACAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

0.75

78.6

Major PPT

93.2

0.97

0.6

88.6

21.1

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

-0.2

2.1

64.91

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958