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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5170751_5171142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5170751 - 5171142

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATTTCACTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

75.4

0.57

0.8

72.9

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

66.6

0.6

1.9

89.02

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958