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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5171179_5171512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5171179 - 5171512

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCTGCTTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

78.6

37.5

Major BPS

0.85

0.9

39.9

Major PPT

78.4

0.64

0.9

70.1

40.4

Minor 5ss

38.7

-1.3

51.4

45.2

Minor BPS

66.6

0.6

1.3

78.01

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958