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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5171846_5172228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5171846 - 5172228

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

CTGTTCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

CACACCTGACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

60.1

0.25

35.6

Major PPT

81.7

0.71

0.8

73.5

37.1

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

46.6

-0.1

1.8

58.42

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958