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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5172641_5173434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5172641 - 5173434

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACACA

5'SS Class:

major

3'SS Sequence:

GTCACCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

GTCACCTTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

65.1

40.8

Major BPS

58.7

0.22

1.2

Major PPT

71.4

0.48

0.9

64.2

36.6

Minor 5ss

37.9

-1.4

3.1

49.9

46.1

Minor BPS

0.31

1.8

68.83

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958