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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5173654_5174168_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5173654 - 5174168

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

ATAAAACAACTT

Flanking Amino Acid:

KPEVAADDCKIKDGRWHRTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

37.9

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

69.4

0.44

0.9

64.1

Minor 5ss

40.8

-1

3.1

58.8

45.7

Minor BPS

31.8

-1.3

47.09

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958