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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5177450_5177546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5177450 - 5177546

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCCGT

5'SS Class:

major

3'SS Sequence:

GTTCCATCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

GAGTCCTCAAAG

Flanking Amino Acid:

AVMDNATVDGLLGHWVYIMG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

73.1

0.58

73.8

32.3

Major PPT

67.4

0.39

62.6

38.7

Minor 5ss

39.2

-1.2

3.1

48.4

47.2

Minor BPS

52.5

-0

1.8

55.53

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032074

5177162 - 5179058

1897

ENSAPLT00000020528

5177162 - 5184486

7325

ENSAPLT00000002618

5177162 - 5180345

3184