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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5177690_5178290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5177690 - 5178290

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGGACG

5'SS Class:

major

3'SS Sequence:

CCGTGCCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

GGTCCCCGCACT

Flanking Amino Acid:

DEFSVTETLRLGGAGGVHGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

60.3

Major BPS

64.5

0.36

65.2

28.2

Major PPT

71.9

0.49

0.9

61.4

40.1

Minor 5ss

35.5

-1.6

3.2

51.1

Minor BPS

44.5

-0.3

2.2

65.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020528

5177162 - 5184486

7325

ENSAPLT00000002618

5177162 - 5180345

3184