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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5178058_5178290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5178058 - 5178290

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

CCGTGCCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

GGTCCCCGCACT

Flanking Amino Acid:

IFRHNSTLMHVEGQEASMAE

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.2

49.4

46.7

Major BPS

64.5

0.36

65.2

28.2

Major PPT

71.9

0.49

0.9

61.4

40.1

Minor 5ss

30.5

-2.2

3.4

40.1

45.5

Minor BPS

44.5

-0.3

2.2

65.41

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032074

5177162 - 5179058

1897