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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5178393_5178486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5178393 - 5178486

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCACG

5'SS Class:

major

3'SS Sequence:

ACCTTCCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACCTTCCCAACA

Flanking Amino Acid:

QGVLPGPQPLGTDTQREQGA

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

62.3

43.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

68.4

0.41

0.9

62.7

32.6

Minor 5ss

33.8

-1.8

2.8

32.9

41.7

Minor BPS

47.9

-0.1

1.9

58.12

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032074

5177162 - 5179058

1897

ENSAPLT00000020528

5177162 - 5184486

7325

ENSAPLT00000002618

5177162 - 5180345

3184