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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5178588_5178664_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5178588 - 5178664

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGCGAG

U12 Branch Point Sequence:

TGGGTGCGAGCC

Flanking Amino Acid:

AGGDLRHLPEGRLSPRGQGE

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.5

37.3

Major BPS

36.9

-0.8

1.7

29.6

44.5

Major PPT

58.2

0.18

0.9

55.3

Minor 5ss

33.3

-1.9

3.1

43.9

43.5

Minor BPS

32.3

-1.3

2.2

39.97

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020528

5177162 - 5184486

7325

ENSAPLT00000002618

5177162 - 5180345

3184