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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5178733_5178830_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5178733 - 5178830

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAACCCC

5'SS Class:

weak_major

3'SS Sequence:

TGTCTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

TGTCTTCCAACA

Flanking Amino Acid:

HLGHRRRVTGRTHTVPFPEG

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.5

0.08

1.1

43.8

38.2

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

74.9

0.56

0.9

70.3

35.1

Minor 5ss

34.3

-1.8

3.1

39.3

40.2

Minor BPS

47.4

-0.2

1.8

62.42

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020528

5177162 - 5184486

7325

ENSAPLT00000002618

5177162 - 5180345

3184