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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5179029_5179814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5179029 - 5179814

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGAA

5'SS Class:

major

3'SS Sequence:

TATGCTCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGTAT

U12 Branch Point Sequence:

TATGCTCCATCA

Flanking Amino Acid:

RQNPGDLGDGAAMAAAGIAA

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

64.6

37.4

Major BPS

47.6

-0.1

1.5

46.8

46.7

Major PPT

70.1

0.45

67.9

38.5

Minor 5ss

29.8

-2.3

3.2

28.9

43.6

Minor BPS

42.9

-0.5

2.1

57.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020528

5177162 - 5184486

7325

ENSAPLT00000002618

5177162 - 5180345

3184