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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5180375_5180776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5180375 - 5180776

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

GCTCTCTCAAAG

Flanking Amino Acid:

DGGGTVLVKHAKTQQTVGTL

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

72.7

0.56

30.1

Major PPT

66.3

0.37

66.6

33.4

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

47.8

-0.3

1.7

51.04

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020528

5177162 - 5184486

7325