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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5187499_5187947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5187499 - 5187947

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCGTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

CATTACTTACTG

Flanking Amino Acid:

ALVRTRMQAQASVEGAPEVT

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

82.2

0.73

0.9

76.5

37.5

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

50.4

-0.1

1.9

57.21

44.5

Associated Gene:

Gene:

SLC25A25

Ensembl Gene ID:

ENSAPLG00000002420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023073

5185308 - 5207058

21751

ENSAPLT00000020313

5186450 - 5208002

21553

ENSAPLT00000002452

5184987 - 5194406

9420

ENSAPLT00000046999

5187172 - 5200005

12834

ENSAPLT00000042999

5186450 - 5194406

7957