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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5235877_5236175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5235877 - 5236175

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TCTCCCATTATA

Flanking Amino Acid:

PCICRVSVRKELKGGKTYSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.7

34.4

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

75.6

0.58

0.8

69.6

29.6

Minor 5ss

35.5

-1.7

3.5

49.2

47.3

Minor BPS

49.9

-0

1.9

65.84

40.3

Associated Gene:

Gene:

FAM102A

Ensembl Gene ID:

ENSAPLG00000001915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002010

5218639 - 5248421

29783