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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5236206_5239871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5236206 - 5239871

Intron Length:

3666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGGCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

TTCCCCTCCATT

Flanking Amino Acid:

ELKGGKTYSKLGFADLNLAE

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

52.4

0.06

1.3

41.7

Major PPT

0.56

0.9

68.1

37.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

0.11

73.49

43.7

Associated Gene:

Gene:

FAM102A

Ensembl Gene ID:

ENSAPLG00000001915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002010

5218639 - 5248421

29783