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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5239989_5240477_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5239989 - 5240477

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCAG

5'SS Class:

major

3'SS Sequence:

TCCCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

GGATGGCTAACT

Flanking Amino Acid:

NTRQDNSILKVTIGMSLLSG

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

60.7

45.5

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

81.8

0.71

0.7

76.4

25.7

Minor 5ss

-2.4

3.4

37.7

47.1

Minor BPS

42.4

-0.4

2.6

63.33

Associated Gene:

Gene:

FAM102A

Ensembl Gene ID:

ENSAPLG00000001915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002010

5218639 - 5248421

29783