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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5245312_5245491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5245312 - 5245491

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCCTTTTATT

Flanking Amino Acid:

RPALLLDRPSRRKKDSVESH

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

72.7

38.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

87.9

0.85

0.6

81.4

30.6

Minor 5ss

35.1

-1.7

45.5

42.9

Minor BPS

67.9

0.65

1.6

85.32

34.8

Associated Gene:

Gene:

FAM102A

Ensembl Gene ID:

ENSAPLG00000001915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002010

5218639 - 5248421

29783