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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5246494_5247375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5246494 - 5247375

Intron Length:

882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

TTCTCCTCCTCT

Flanking Amino Acid:

TTLSGIQLGNRVSSGVYEPV

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

82.3

32.2

Major BPS

61.3

0.28

30.6

Major PPT

76.2

0.59

0.8

73.2

31.7

Minor 5ss

43.4

-0.7

3.1

60.6

44.5

Minor BPS

41.7

-0.5

3.7

75.91

46.6

Associated Gene:

Gene:

FAM102A

Ensembl Gene ID:

ENSAPLG00000001915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002010

5218639 - 5248421

29783