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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5255809_5256116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5255809 - 5256116

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TCTGACCTAATT

Flanking Amino Acid:

VAGLLLLLFIGVFIMVVTWK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

81.3

32.8

Major BPS

73.1

0.57

71.9

31.3

Major PPT

0.43

64.8

36.3

Minor 5ss

36.8

-1.5

3.5

49.2

Minor BPS

51.6

0.13

73.36

43.7

Associated Gene:

Gene:

DPM2

Ensembl Gene ID:

ENSAPLG00000001324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001316

5255051 - 5256175

1125