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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5290549_5291465_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5290549 - 5291465

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGGAA

U12 Branch Point Sequence:

TATCTCCCAACC

Flanking Amino Acid:

SQLCGSITPEVWPNVDKYEL

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

49.8

-0

1.4

51.3

44.2

Major PPT

74.4

0.55

0.8

65.4

36.1

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

49.7

-0

1.9

66.31

38.5

Associated Gene:

Gene:

CDK9

Ensembl Gene ID:

ENSAPLG00000021148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042279

5288705 - 5294707

6003

ENSAPLT00000031492

5288705 - 5294747

6043