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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5291859_5292025_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5291859 - 5292025

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGGC

5'SS Class:

major

3'SS Sequence:

CGTCCTCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAA

U12 Branch Point Sequence:

GGTGGCTCAATC

Flanking Amino Acid:

NGLYYIHRNKILHRDMKAAN

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.2

64.8

41.3

Major BPS

52.8

0.07

1.3

57.3

41.7

Major PPT

71.2

0.48

65.1

36.3

Minor 5ss

35.1

-1.7

3.6

50.2

46.4

Minor BPS

46.3

-0.3

42.6

Associated Gene:

Gene:

CDK9

Ensembl Gene ID:

ENSAPLG00000021148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042279

5288705 - 5294707

6003

ENSAPLT00000031492

5288705 - 5294747

6043