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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5293991_5294440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5293991 - 5294440

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

CTTCTCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TGCTCCTGACCC

Flanking Amino Acid:

KVLMENEKEGFPITALREIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.1

41.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

87.3

0.84

0.7

84.7

Minor 5ss

38.3

-1.3

41.6

45.3

Minor BPS

57.5

0.22

1.8

68.01

43.3

Associated Gene:

Gene:

CDK9

Ensembl Gene ID:

ENSAPLG00000021148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042279

5288705 - 5294707

6003

ENSAPLT00000031492

5288705 - 5294747

6043