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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5294523_5294655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5294523 - 5294655

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGAGCG

5'SS Class:

major

3'SS Sequence:

CCCCTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCTCACAGCC

Flanking Amino Acid:

KLAKIGQGTFGEVFKAKHRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

59.5

39.8

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

73.1

0.52

0.8

64.2

Minor 5ss

24.9

-2.9

22.5

36.9

Minor BPS

38.1

-0.9

1.8

40.2

39.4

Associated Gene:

Gene:

CDK9

Ensembl Gene ID:

ENSAPLG00000021148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031492

5288705 - 5294747

6043