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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5298879_5301739_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5298879 - 5301739

Intron Length:

2861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTACCCGCACA

Flanking Amino Acid:

GRRFPTLGQGSHHNGLESGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

85.2

0.79

0.7

76.8

31.9

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

47.6

-0.1

2.2

70.19

41.5

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498