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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5310450_5310670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5310450 - 5310670

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CATCCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

TGTGCCTGAGCC

Flanking Amino Acid:

AWYHGRIPREVSESLVQRNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

66.1

0.36

58.1

38.1

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

54.6

0.12

1.8

68.35

42.8

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498