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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5311120_5312372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5311120 - 5312372

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

GCCCCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAC

U12 Branch Point Sequence:

AGTGCCAGACTA

Flanking Amino Acid:

KITRAEGCPTSVSLPHHRDI

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

74.9

35.3

Major BPS

59.1

0.23

1.2

61.6

34.1

Major PPT

66.8

0.38

0.8

57.1

33.4

Minor 5ss

27.6

-2.6

32.2

42.5

Minor BPS

42.2

-0.6

1.9

52.37

39.6

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498