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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5312498_5312937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5312498 - 5312937

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGCACA

5'SS Class:

major

3'SS Sequence:

CTGCTCCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GCTGTGCTAACA

Flanking Amino Acid:

ENPTSPAYSTVTRLKPHACQ

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

62.5

43.9

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

71.7

0.49

0.8

64.9

30.8

Minor 5ss

37.8

-1.4

3.1

40.8

45.3

Minor BPS

43.4

-0.5

2.3

55.78

43.5

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498