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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5313243_5313387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5313243 - 5313387

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGAGGAA

5'SS Class:

major

3'SS Sequence:

TGCCGCCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CCTCCTTTAACC

Flanking Amino Acid:

PAKSYVERLKSLLIPLENKP

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

58.6

Major BPS

77.3

0.68

79.3

29.4

Major PPT

72.2

0.5

0.9

61.6

Minor 5ss

-3.3

3.5

27.5

44.3

Minor BPS

70.7

0.63

1.3

71.26

40.4

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498