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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5313511_5313705_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5313511 - 5313705

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

CTTTTCTCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AAAGCTCTAATC

Flanking Amino Acid:

AKHITKVDCVVARILGVTAE

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

50.8

45.6

Major BPS

82.2

0.8

0.9

81.6

Major PPT

78.9

0.65

0.9

73.5

37.1

Minor 5ss

30.1

-2.3

3.4

36.2

42.8

Minor BPS

48.3

-0.1

1.7

55.4

36.7

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498