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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5313822_5313951_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5313822 - 5313951

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGGCAC

5'SS Class:

major

3'SS Sequence:

CGCCCCACGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GCGTGCTGAGCT

Flanking Amino Acid:

GHQLRLDLLERFHTMSIMIA

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

55.4

43.7

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

56.6

0.15

50.7

32.6

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

45.6

-0.2

2.1

61.44

47.8

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498