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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5315720_5315833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5315720 - 5315833

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCGAG

5'SS Class:

major

3'SS Sequence:

CCCTTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CATCCCAGACCC

Flanking Amino Acid:

YHTNAEVKLQGFQGRAELLE

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.2

43.4

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

74.5

0.55

0.7

68.7

Minor 5ss

35.2

-1.7

3.3

38.1

46.8

Minor BPS

44.2

-0.4

55.24

42.2

Associated Gene:

Gene:

SH2D3C

Ensembl Gene ID:

ENSAPLG00000007801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008109

5298835 - 5316332

17498

Gene:

TOR2A

Ensembl Gene ID:

ENSAPLG00000021882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044218

5314775 - 5319700

4926