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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5316633_5316915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5316633 - 5316915

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTCAGGGGG

5'SS Class:

major

3'SS Sequence:

GAACTCGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTTTCTCTCACC

Flanking Amino Acid:

CECGFGTDLRGLECDLALSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.4

50.4

43.6

Major BPS

72.7

0.56

30.1

Major PPT

62.3

0.28

51.1

43.4

Minor 5ss

24.5

-2.9

3.2

30.1

42.9

Minor BPS

59.8

0.29

2.1

78.9

36.8

Associated Gene:

Gene:

TOR2A

Ensembl Gene ID:

ENSAPLG00000021882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044218

5314775 - 5319700

4926