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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5317182_5318152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5317182 - 5318152

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

ACCGCCTGACAG

Flanking Amino Acid:

PHAEHIEQYKENLKRWIQGN

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

76.5

0.6

0.9

69.9

40.9

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

41.3

-0.8

1.9

39.32

Associated Gene:

Gene:

TOR2A

Ensembl Gene ID:

ENSAPLG00000021882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044218

5314775 - 5319700

4926