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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5318329_5318682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5318329 - 5318682

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTGTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGACAC

U12 Branch Point Sequence:

TAAGCCAGCACC

Flanking Amino Acid:

NYRKAIFIFISNAGGEQINE

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

69.4

35.7

Major BPS

-0.1

1.3

52.4

43.3

Major PPT

81.1

0.7

0.9

76.8

37.3

Minor 5ss

25.3

-2.8

3.2

32.7

42.3

Minor BPS

42.4

-0.6

2.1

54.58

42.7

Associated Gene:

Gene:

TOR2A

Ensembl Gene ID:

ENSAPLG00000021882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044218

5314775 - 5319700

4926