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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5318811_5319367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5318811 - 5319367

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TTTGCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TGAAGGTAAAAT

Flanking Amino Acid:

ISKAVFENPQSGFWKSGIIN

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.1

59.5

39.8

Major BPS

69.8

0.49

37.5

Major PPT

89.3

0.88

0.7

84.5

30.4

Minor 5ss

31.3

-2.1

2.8

33.6

34.8

Minor BPS

37.5

-0.8

2.5

55.53

45.8

Associated Gene:

Gene:

TOR2A

Ensembl Gene ID:

ENSAPLG00000021882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044218

5314775 - 5319700

4926