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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5320899_5324741_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5320899 - 5324741

Intron Length:

3843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGAGC

5'SS Class:

major

3'SS Sequence:

GTCTGTGGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GATGTTTGAGCC

Flanking Amino Acid:

FLPIMYDKHPNSQATAGWCL

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.6

39.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

56.5

0.15

1.2

49.4

Minor 5ss

34.3

-1.8

3.2

43.3

38.2

Minor BPS

45.2

-0.3

1.7

52.6

38.8

Associated Gene:

Gene:

CERCAM

Ensembl Gene ID:

ENSAPLG00000023317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018529

5320712 - 5331485

10774