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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5325464_5325555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5325464 - 5325555

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACCGTG

5'SS Class:

major

3'SS Sequence:

CCTCACCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

GACCCCTCACCT

Flanking Amino Acid:

AVRVVDAVDGSTLNSSDIKV

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

63.1

43.4

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

71.9

0.49

0.8

64.9

30.2

Minor 5ss

-1.1

3.4

49.2

Minor BPS

48.5

-0

1.9

64.01

45.5

Associated Gene:

Gene:

CERCAM

Ensembl Gene ID:

ENSAPLG00000023317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018529

5320712 - 5331485

10774