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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5326861_5327211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5326861 - 5327211

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTCGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTAAC

U12 Branch Point Sequence:

TCCCCGTTAACC

Flanking Amino Acid:

SVVWKEAEGPSAYPDELGPK

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

62.1

0.3

1.2

38.7

Major PPT

66.4

0.37

0.9

31.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

56.9

0.2

2.1

67.59

44.2

Associated Gene:

Gene:

CERCAM

Ensembl Gene ID:

ENSAPLG00000023317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018529

5320712 - 5331485

10774