Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_5333891_5334637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5333891 - 5334637

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCTGTACT

5'SS Class:

major

3'SS Sequence:

CCTTGGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTTCTTTCTT

Flanking Amino Acid:

LINDADWELMGELDYKLQDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.3

69.8

40.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

73.1

0.52

0.9

65.3

36.2

Minor 5ss

-1.1

2.5

49.7

40.4

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

URM1

Ensembl Gene ID:

ENSAPLG00000008603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045445

5333822 - 5348096

14275

ENSAPLT00000008945

5333822 - 5347361

13540