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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5335821_5346807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5335821 - 5346807

Intron Length:

10987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TCTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

TCGCCTGTAACC

Flanking Amino Acid:

QVTLPSQPEPWDIRNLLKWI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

76.1

32.8

Major BPS

62.2

0.3

1.2

38.7

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

37.4

-1.4

2.9

51.7

39.2

Minor BPS

51.1

0.01

63.04

42.9

Associated Gene:

Gene:

URM1

Ensembl Gene ID:

ENSAPLG00000008603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045445

5333822 - 5348096

14275

ENSAPLT00000008945

5333822 - 5347361

13540